Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKLEVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK |
1W8X Chain:P ((6-27)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLYWVGGGLVLILIWLWFRNRPAAQVASNWEGPPY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4337 for 82 contacts (-52.9/contact) +
2D Compatibility (PS) -2244 + (NN) -946 + (LL) 10448
1D Compatibility (HY) -3200 + (ID) 300
Total energy: -579.0 ( -7.06 by residue)
QMean score : 0.249
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