Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNPTFGEKIDNVDYRSRFGVYAIIPNPTHDKIILVQAPN-GAWFLPGGEIEENENHLEALTRELIEELGYSATIGHY-----YGQADEYFYSRHRDTYYYNPAYIYEVTAYH-------KEQAPLEDFNHLAWFPIQEAKEKLKRGSHRWGVQAWEKNHHSRK
3FJY Chain:A ((39-165))
-------------------------------EVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVE-------------HTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHSTDKDTLAVFVDRVQEGA
General information:
TITO was launched using:
RESULT:
Template:
3FJY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24427 for 584 contacts (-41.8/contact) +
2D Compatibility (PS) -10232 + (NN) -2954 + (LL) 1848
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -41565.0 ( -71.17 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_3FJY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FJY-query.scw
PDB file :
Tito_Scwrl_3FJY.pdb
: