Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIKIVTDSSITIEPELIKELDITVVPLSVMIDGTLYSDNDLKAQGEFLNLMRGSKELPKTSQPPVGVFAEIYEKLMNEGAEHIIAIHLTHTLSGTIEASRQGANIA-----GADVTVIDSTFTDQCQKFQVVEAAKLAKEGADLDTILARVEEVRQKSELFIGVSTLENLVKGGRIGRVTGLLSSLLNIKVIMELTNHELVPIVKGRGLK-TFSKWLDNFVESAQTRKIAEIGISYCGKADMANNFKEKLAV--LGAPISVLETGSIIQTHTGEDAFAVMVRYE |
| 1PZX Chain:A ((3-284)) | -MPIEIITDSGADLPQSYIREHRIAFLPLVVHWNGQDYKDGITIEPKQVYDAMRQ-GHTVKTAQPSPLAMKELFLPYAKE-NRPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLTIIDSKCASLGQGLAVMKAVELAKQNTPYNLLCETIESYCRHMEHIFTVDNLDYLARGGRIS----------NIKPLLHVEDGALIPLEKWRGRKKVLKRMVELMGERGDDLQKQTIGISHADDEETALELKQMIEETHGCTRFFLSDIGSAIGAHAGPGTIALFFLNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135649 for 2300 contacts (-59.0/contact) +
2D Compatibility (PS) -29600 + (NN) -14706 + (LL) 828
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -198527.0 ( -86.32 by residue)
QMean score : 0.503
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