Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQKSNYFKGQIDYAVVIPVFFLLMIGLASIYVATMNDYPSNIYIAMFQQVSWIIMGCIIAFVVMLFSTEFLWKATPYLYALGLTLMVLPLIFYSPQLFAATGAKNWVTIGSVTLFQ-PSEFMKISYILMLSRITVSFHQKNRKTFQDDWKLLGLFGLVTLPVMILLMLQKDLGTALVFLAILSGLILLS-GISWWIILPILSTIVLFIASFLMIFISPNG--KEWFYNLGMDTYQINRLSAWIDPFSFADSIAYQQTQGMVSIGSGGV-TGKGFNILELSV-PVRESDMIFTVIAENFGFI-GSAIVLG-LYLIIIYRMLRITIESNNQFYTFISTGFIMMIVFHVFENIGAAVGILPLTGIPLPFISQGGSSLLSNLIGIGLVLSMSYQNTVRQAKANGSHLKYRSI |
| 4PX7 Chain:A ((1-258)) | ----------------------------------------------------------------------------------------------------GRSIARRTAVGAALLLVMPVAVWISGWRWQPGSWLLKAAFWVTETVTQPW---GVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEP-----RPFVIWLEKTHHMPVDKFYTLKR-AERGNLVKEQLAEPQYLRSHWQKET-GF-AFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHW------------PRDLVVATLISWALVAVATWLAQRICGPLTPPEENREIAQREQESLEHH----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PX7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137075 for 1708 contacts (-80.3/contact) +
2D Compatibility (PS) -24326 + (NN) 2752 + (LL) 15904
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: -155945.0 ( -91.30 by residue)
QMean score : 0.128
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