Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLSSEEIIKMLPHRYPFLMVDRVQ--SYKKGIIECRKNITINEPYFQGHFPQRPIVPGVLMIEMAAQSAALLYILDALDGSLPSLDELTAEKIAEKVGYLASVKNFKFKKIVTPGDQLNITCKSQSKLGHLLEIQVVIRDENKKEVASGRMLVSENGN
1U1Z Chain:A ((26-132))
-------EIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGIL-----------GFKMLDVKP---TLYYFVGSDKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEIICAERK--
General information:
TITO was launched using:
RESULT:
Template:
1U1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59351 for 637 contacts (-93.2/contact) +
2D Compatibility (PS) -10775 + (NN) -2630 + (LL) 1568
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -84388.0 ( -132.48 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1U1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U1Z-query.scw
PDB file :
Tito_Scwrl_1U1Z.pdb
: