Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYLEQLKEVNPLTICITNNVVKNFTANGLLALGASPAMSECIEDLEDLLKVANALLINIGTLTKESWQLYQEAIKIANKNQVPVVLDPVAAGASRFRLEVSLDLLKNYSISLLRGNGSEIAALVG-EKQASKGADGGKVADLESIAVKANQVFDVPVVVTGETDAIAVRGEVRLLQNGSPLMPLVTGTGCLLGAVLAAFIGSSDRSDDLACLTEAMTVYNVSGEIAEKVAKGKGVGSFQVAFLDALSQMKSEMIMDK
1ESQ Chain:C ((22-274))
--LTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWL---------GDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGSLLTSVVGAFCAVEE--NPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEW
General information:
TITO was launched using:
RESULT:
Template:
1ESQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -194953 for 2200 contacts (-88.6/contact) +
2D Compatibility (PS) -25620 + (NN) -8195 + (LL) 216
1D Compatibility (HY) -13600 + (ID) 5050
Total energy: -247202.0 ( -112.36 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1ESQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ESQ-query.scw
PDB file :
Tito_Scwrl_1ESQ.pdb
: