Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFFTNKFWLGVVSLFLAILLFLTATATSMNHQDNSKIAGASETYTHTLTDVPIDIKYDSDDYFISGYSYGADVYMSSVNRV-KLDSEINEDTRKFKVVADLTNMKPGTHKVPLK------VVNLPSGVNATVSPTTITVTMGKKKTKEFPVYGHV---------NDKQIKAG-YAVDKMSVDVSKVKVTSD---ESIIDRIDHVAANIPDDKVLDDDFNKTVTLQAVTADGTVLA--SIIHPSKATLSVKVKKLTKTVPINLIPVGQFSDSISKINYKLSQEKAVISGTKEALEAISVINAEVDISDVTKNTEKKINLSANNVSVDPAQVTVQLTTTKK |
| 4KKU Chain:A ((53-282)) | ------------------------------------------------------------------------ADIFPDAVGKITSLRIKLGAYVQKGQIVATLDP------KSPVRAPISGYILNITKKIGETVNPQSNIAVVGRIDTKQILTYVSEKYISNIKVGNDAIIEVGAYSNEKFKAKVSEISPILDSKSRTIEVYLTPIGSNL--DKLIIGMFSKIKLITKRFKDVIKISREAVVEREGKKFVFKVDLESKSVQMLPITVLFEIDNIVALSGEVEENDLIVVEGMSALSNGSLINLVDTKEGLSAESNI------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31036 for 1229 contacts (-25.3/contact) +
2D Compatibility (PS) -21023 + (NN) 6732 + (LL) 6128
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -53549.0 ( -43.57 by residue)
QMean score : 0.236
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