Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITIDKILEILKNDHNFREILFHEHYYYNWTQNVTFNALSYDSRQISSDTLFFAKGATFKKEYLDSAITAGLSFYVSEIDYGADIPVILVNDIKKAMSLISMSFYNNPQNKLKLLAFTGTKGKTTAAYFAYHMLKVNHRPAMLSTMNTTLDGKSFFKSHLTTPESLDLFRMMATAVENQMTHLVMEVSSQAYLTKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFFHKRLLM---ENSNAVVVNSQMDHFN--IVKE-----QVEYIPHDFYGDYSENVITESQAFSFHVKGK-LENTYDIKLIGKFNQENAIAAGLACLRLGVSIEDIKNGIAQ-TTVPGRMEVLTQTNGAKIFVDYAHNGDSLKKLLAVVEEHQKGDIILVLGAPGNKGQSRRKDFGDVINQHPNLQVILTADDPNFEDPLVISQEIASHINRPVTIIIDREEAIANASTLTNCKLDAIIIAGKGADAYQIIKGNRDNYSGDLEVAKKYLKR |
3LK7 Chain:A ((113-328)) | ----------------------------------------------------------------------------------------------------------------QLIGITGSNGKTTTTTMIAEVLNAGGQRGLLA-------------GNIGFPAS------EVVQAANDKDTLVMELSS--FQLMGVKEFRPHIAVITNLMPTHLD--YHGSFEDYVAAKWNIQNQMSSSDFLVLN-----FNQGISKELAKTTKATIVPFSTTEKVDGAYVQDKQLF---YKGENIMSVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFDNTKVILIAGGLDRGNEFDELIPDITGLKHMVVLGESASRVKRAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVRGDEFIDTFESLRGE-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -97806 for 1627 contacts (-60.1/contact) +
2D Compatibility (PS) -21535 + (NN) -4434 + (LL) 11140
1D Compatibility (HY) -8800 + (ID) 2900
Total energy: -124335.0 ( -76.42 by residue)
QMean score : 0.382
|
|
|