Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MIYKIIASLFLVLIPIFSQVLVKIFKLKKFNIMFPDVAFPIFVFLIPLISSSLLKQNLLPYYLILISLLAIGITIKLLRTKTLFSYKRFLKLFWRSGFILTFLFYLGLLVIIFIKVQ
1P68 Chain:A ((1-102))
MYGKLNDLLEDLQEVLKNLHKNWHGGKDNLHDVDNHLQNVIEDIHDFMQGGGSGGKLQEMMKEFQQVLDELN----NHLQGGKHTVHHIEQNIK---------EIFHHLEELVHR-----
General information:
TITO was launched using:
RESULT:
Template:
1P68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146981 for 761 contacts (-193.1/contact) +
2D Compatibility (PS) -9576 + (NN) 3088 + (LL) 1968
1D Compatibility (HY) 2000 + (ID) 800
Total energy: -150301.0 ( -197.50 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_1P68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P68-query.scw
PDB file :
Tito_Scwrl_1P68.pdb
: