Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLAVLGTGMIVKEV-LPVLQKIEGIDLVAILSTVRSLETAKDLAKEYNMSLATSEYKAVLDNEEIDTVYIGLPNHLHFDYAKEALLAGKHVICEKPFTLEASQLEELVSIANTRQLILLEAITNQYLPNFDLVKEHL--SNLGDIKIVECNYSQYSSRYDAFKRGEIAPAFNPEMGGGALRDLNIYNLHLVIGLFGEPITAQ-YLPNIERG--IDTSGVLVLDYGHFKTVCIGAKDCSAEV-----KSTIQGDKGSIAILGPTNTMPKISLTMNGQESHVYQLNGDRHRMHDEFVIFEGIISNLDFKRAAQALEHSRTVMKVLDMVTK |
| 3E82 Chain:A ((8-250)) | INIALIGYGFVGKTFHAPLIRSVPGLNLAFVAS--RDEEKVKRDLPDVTV-IASPE--AAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTLGAVKHFESHFDRFRPEV-----------------SGLWFDLGPHLIDQALQLFGLPQSVQGNIATLRDGAEINDWAHVVLNYPAHKVIL----HCSMLVAGGSSRFTVHGDKGSVIKARADQQESQLLAGVVPGSADWGQDDDPLVIYDASLQAHAQATPQGDQRQYYMLIRDALKGQIANPVPPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142552 for 1663 contacts (-85.7/contact) +
2D Compatibility (PS) -23552 + (NN) -8833 + (LL) 1312
1D Compatibility (HY) -14000 + (ID) 3250
Total energy: -190875.0 ( -114.78 by residue)
QMean score : 0.455
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