Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNVKDITRESWILSTFPEWGTWLNEEIEEEVVADGNFAMWWLGNCGVWIKTPGGANVVMDLWSNRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRA--QPMVIDPFAI-NELDYYLVSHFHSDHIDINTAAAIINNPNLDHVKFVGPYECG-EIWKKWGVPEERIIVIKPGESFEFKDIKVTAVESFDRTCLVTLPVDGAEEHDGELAGLAVTDEEMARKAVNYIFET-PGGTIYHGADSHFSNYFAKHGKDYKIDVAINNYGDNPV---GIQDKMTSIDLLRMAENLRAKVIIPVHYDIWSNFMASTDEILQLWKMRKERLQYDFHPFIWEVGGKYTYPQDKDRIEYHHPRGFDDCFEQESNIQFKALL |
| 3RPC Chain:A ((3-264)) | -----------------------------------AMTQYTHIRNATGKLTIK-NTTFLIDPFLAPKDTYPGFE---------GTFNYQ-----QRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWD--DTAINSIP---KSLPIFVQNTADKELITSQGF--ID--VRIIFESLEFNGITLRKTGGSHGTVEMYAN------------PVL---APLAGDAMGVIFEAADEPTVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGNN----IESHVAVPEDGETITL------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151746 for 2165 contacts (-70.1/contact) +
2D Compatibility (PS) -27976 + (NN) -15867 + (LL) 6764
1D Compatibility (HY) -7600 + (ID) 2350
Total energy: -198775.0 ( -91.81 by residue)
QMean score : 0.451
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