Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSITSVKKSKPFKLGVAGLLVGASLALPLSVSA-----ASYTVKSGDTLSAIAKNHKTTVQELVSLNSISNADVISIGDVLKLDNSKASQAEAKSQPTIENSMNSSSNLSSSDSAAKEEIARRESNGSYTAQNGQYYGRYQLSQSYLNGDLSPENQEKVADNYVVSRYGSWSAALSFWNSNGWY |
2CLH Chain:B ((261-351)) | --IETGEHGAPLKHGRVGIYFG--MKAPMMQTADGQIEESYSISAGLDFPSVGPQH-------AYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHDILKARGE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CLH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11797 for 527 contacts (22.4/contact) +
2D Compatibility (PS) -8681 + (NN) -608 + (LL) 2392
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -400.0 ( -0.76 by residue)
QMean score : 0.074
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