Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQNKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKYSSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKD--M-DIKDDEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF
3KF6 Chain:B ((514-573))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DCKDGQKLRFLGCVQSYK----NGILRL----ID---G--SSSVTCDVTVVLPDVSIQKHEWLNIVGRKRQDG-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3KF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 171 -28259 -165.26 -495.77
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.50

3D Compatibility (PKB) : -165.26
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_3KF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KF6-query.scw
PDB file : Tito_Scwrl_3KF6.pdb: