Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIILVMFLLGIILGFIGAGGAGFVIALLTLLFHIPIHTALGTSLAGMAFTSLSGAYSHYREGNIQMKIGLIVGGFAAVGSFFGAKLTSFIPADLLHYLTAGMLFLSAILILIRLFILKEKAQVNQSTLSTYTRAVILGIAAGVLSGTFGIGSAPFIQIGLMIMLNLSIRHSVGTTMLVIIPLAVGGGIGYITEGFVDYVLLVKVLVGTMCGAYVGAKFTNLMPKVVLKSAIFLTPAIAGLLLLF
4QAS Chain:A ((5-201))--------------------------SMFKLLLIFADPAEAARTLSLFPFSLNKENFYTYHTENVLLDVMV-LKTWGYRGVVQALSPPPSGYDLWINAGFAGAANPNIPLLKTYTITSVKELTPTTSVEEELEVTPIPRLPLAQLTSVRSPYRDGFHEH----------LQLVDMEGFFIAKQASLVACP---------CSMIKVSSNYT-TREGQDFLKNNKVKLSQKLAEAIFPIYSSFIDV-


General information:
TITO was launched using:
RESULT:

Template: 4QAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1070 -152826 -142.83 -775.77
target 2D structure prediction score : 0.30
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -142.83
2D Compatibility (Sec. Struct. Predict.) : 0.30
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.174

(partial model without unconserved sides chains):
PDB file : Tito_4QAS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QAS-query.scw
PDB file : Tito_Scwrl_4QAS.pdb: