Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQDMILTLQKHWSSQGCVLMQAYDVEKGAGTMSPYTFLRSIGPEPWKVAYVEPSRRPADGRYGENPNRLYQHHQFQVIIK--PSPD---NIQELYLDSLRALGIDPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQF----TYFQQVGGLECKPVSVEITYGIERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFQLFSTYEKEAIKQMDNGLVHPAYDYVLKCSHTFNLLDAKGAISVTERTGYIARVRNLARKVAKTYYEEREKLGFPMLKGEGSSHE
3DSQ Chain:A ((146-273))-------------------------------------------WDKPIRIFEIGTCYRKESQ----GAQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIR----EFELVTESSVVYGDTV-----DVMKGDLELASGAMGPHFLDEKWEIF-DPWVG-LGFGLERLLMIREGTQHVQSM----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 509 -12544 -24.64 -105.41
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -24.64
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.561

(partial model without unconserved sides chains):
PDB file : Tito_3DSQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DSQ-query.scw
PDB file : Tito_Scwrl_3DSQ.pdb: