Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANIKEIARLANVSVSTVSRVLNHHPYVSEEKRKLVHQVMKELDYTPNRTAIDLIRGKTHTVGVILPYSDHPCFDKIVNGITKAAFQHEYATTLLPTNYNPDIEIKYLELLRTKKIDGLIITSRANHWDSILAY-QEYG--PVIACE------DTGDIDVPCAFNDRKTAYAESFRYLKSRGHENIAFTCVREADRSPSTADKAAAYKAV---CGRLEDRHMLSGCNDMNDGELAAEHFYMSGRVPTAIYANSDEVAAGIHLFAKKNNW----DVEIIGEGNTSISRVL--GFPSLDLNLEQLGIAAFSLFL------QDEPADIKIQHKFKKKA
1QP0 Chain:A ((2-327))--TIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMC-SEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMA----GRYLIERGHREIG-VIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIER-


General information:
TITO was launched using:
RESULT:

Template: 1QP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1523 -72025 -47.29 -238.49
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -47.29
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_1QP0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QP0-query.scw
PDB file : Tito_Scwrl_1QP0.pdb: