Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLA----TPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL |
| 4P0G Chain:A ((268-380)) | ------------------------------------------------------------------------------------SHFKQSGKQLDTDWRLLAAIGYQESLWQPGA---------------------------------------TSKTGVRGLMMLTNRTAQAMGVS-------NRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33458 for 790 contacts (-42.4/contact) +
2D Compatibility (PS) -11233 + (NN) -569 + (LL) 5584
1D Compatibility (HY) 1600 + (ID) 1150
Total energy: -39226.0 ( -49.65 by residue)
QMean score : 0.256
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