Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTDE
2JM6 Chain:A ((68-94))
---------------------------------------------PADLKDECAQLRRIGDKVNLRQKLLNM-------------
General information:
TITO was launched using:
RESULT:
Template:
2JM6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4918 for 101 contacts (48.7/contact) +
2D Compatibility (PS) -2906 + (NN) 681 + (LL) 2356
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 3449.0 ( 34.15 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2JM6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JM6-query.scw
PDB file :
Tito_Scwrl_2JM6.pdb
: