Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPAAAVGLVILVRSRGLGWAELGLSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNHHYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAWGFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWS----LNGMGALAAALVWHLST |
4XRY Chain:A ((34-72)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YCFDQLRRRFGDVFS-LQLAWTPVVVLNGLAAVREALVTH--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11297 for 154 contacts (-73.4/contact) +
2D Compatibility (PS) -3717 + (NN) 475 + (LL) 18704
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -1435.0 ( -9.32 by residue)
QMean score : -0.060
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