Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSQPAISKTLKELEEILGARLFERSKAGAELTEAGVTFLRYAGPCVQALRDGVNTLRGHEAQVETVRVGVLSTVESLVVPEVIRRLHRRHGALVVSVATGPSAYLLAQLKVGELDLVVGRMTDSPDIQGLTFEHLYSESMMLVVRPGHPLL---AAPLGDLQRLAEFPLVLPLAGTTIRRHADSLFVQWG-IALAGQRLETLSPTLSRSYVLRSEAIWVAPRDAVRLDVGNGELAELDLGIREPGGSVGLCHNAALPLPLGAQWFSAVLREVAAELH
1I69 Chain:A ((7-192))
-------------------------------------------------------------------LHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVILALVK--ESEAFIEVPLFDEPMLLAIYEDHPWANREAVPMAD---LAGEKLLMLEDGHSLRDQAMGFCF---DTHFRATSLETL-----RNMVAAGSGITLLPALAVPPERKRDGVVYLPAIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHF
General information:
TITO was launched using:
RESULT:
Template:
1I69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123002 for 1306 contacts (-94.2/contact) +
2D Compatibility (PS) -18673 + (NN) -5203 + (LL) 5692
1D Compatibility (HY) -13600 + (ID) 2450
Total energy: -157236.0 ( -120.40 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_1I69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I69-query.scw
PDB file :
Tito_Scwrl_1I69.pdb
: