Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQAIRSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEKRRD---------------HSAALNDLAQELREEGYSVSTNQ-AWKDSLHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPVLMTKTARP--WTGGKILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHPSPMLSSADPTFQLSETIEARYREACRTFQAEYGFSDEQLHIEEGPADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDVLVLKPDDIIAHLEELASKE |
| 3LOQ Chain:A ((19-293)) | YFQSNAMLLPTDLSENSFKVLEYLGDFKKVGVEEIGVLFVINLTKLGIDIDHYIDEMSEKAEEVLPEVAQKIEAAGIKAEVIKPFPAGDPVVEIIKAS--ENYSFIAMGSRGASKFKKILLGSVSEGVLHDSKVPVYIFKHDMVVNSLFDRVLVAYDFSKWA-------DRALEYAKFVVKKTGGELHIIHVSEDGDKTA--------------DLRVMEEVIGAEGIE-VHVHIESGTPHKAILAKREEINATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVFVCKRGDDE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LOQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141864 for 2151 contacts (-66.0/contact) +
2D Compatibility (PS) -27652 + (NN) -11103 + (LL) 2676
1D Compatibility (HY) -11200 + (ID) 2100
Total energy: -191243.0 ( -88.91 by residue)
QMean score : 0.378
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