Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRIDFSQLHQAREDAAAAMPSIAGKKILMGFWHNWPAGAADGYQQGSFANIALEDVPSEYNVVAVAFMK---GRGIPTFQPYNLSDAEFRRQVGVLNAQGRAVLISLGGADAHIEL--HAGQEQALAAEIVRLVETYGFDGLDIDLEQSAIDLADNQR-----------VLPAALKLVREHYAGQGKHFIVSMAPEFPYLHKN--------GKYVPYLQALEGVYDFIAPQYYNQG-GDGLWVQEANGGKGAWIAQNNDAMKEDFLYYLTESLATGSRDFVRIPAQRLAIGLPSNVDAAATGYVIDPAAVSNAFRRL--------------EAAGHAIKGLMTWSVNWDDGLNKRGERYNWEFRKRYASLIHDGEGGDQRPAAPQGLRLLERGETSLVLAWNASSGQRPIDYYSLYRDGAMVGQSAALGSTDSGLTADTRYSYFVTATDTQGNQSLPSEGLEVSTSGGAVDPQFPQWRENQAYRVDDGVTYEGLRYLCLQAHTSNSGWTPPVAFTLWRPLR |
| 3N1A Chain:A ((5-322)) | ------------------------GSKLLVGYWHNFDNGTGI---------IKLKDVSPKWDVINVSFGETGGDRSTVEFSPVYGTDADFKSDISYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINS-IQSLIDKYGFDGIDIDL-GSGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHY---GPDFLLSMAPETAYVQGGYSAYGSIWGAYLPIIYGVKDKLTYIHVQHFNAGSGIGMDGNNYNQGTADY-----EVAMADMLLHGFPVGGNANNIFPALRSDQVMIGLPAAPAAAPSGGYISPTEMKKALNYIIKGVPFGGKYKLSNQSGYPAFRGLMSWSINWD-------AKNNFEFSNNY---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172435 for 2314 contacts (-74.5/contact) +
2D Compatibility (PS) -29371 + (NN) -8891 + (LL) 9896
1D Compatibility (HY) -24400 + (ID) 4650
Total energy: -229851.0 ( -99.33 by residue)
QMean score : 0.436
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