Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFTASTLAFLLVLAPTVPAMADSGGDIVFERMQAQAAKARAAHQEKLAKQAEATKKDKENC
2V7Q Chain:J ((8-50))
--------------VRSSAGAVRDAGGAFGKREQAEEERYFRARAKEQLAALKKHHE------
General information:
TITO was launched using:
RESULT:
Template:
2V7Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5556 for 174 contacts (31.9/contact) +
2D Compatibility (PS) -5033 + (NN) -5269 + (LL) 1840
1D Compatibility (HY) 0 + (ID) 450
Total energy: -3356.0 ( -19.29 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_2V7Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V7Q-query.scw
PDB file :
Tito_Scwrl_2V7Q.pdb
: