Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
1B56 Chain:A ((3-135))
--TVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
General information:
TITO was launched using:
RESULT:
Template:
1B56.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43961 for 962 contacts (-45.7/contact) +
2D Compatibility (PS) -14660 + (NN) -2243 + (LL) 352
1D Compatibility (HY) -17600 + (ID) 6650
Total energy: -84762.0 ( -88.11 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1B56.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B56-query.scw
PDB file :
Tito_Scwrl_1B56.pdb
: