Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKEA
2WUT Chain:A ((2-132))
MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKNTEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKMKGVVCTRIYEK--
General information:
TITO was launched using:
RESULT:
Template:
2WUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37441 for 949 contacts (-39.5/contact) +
2D Compatibility (PS) -14672 + (NN) -3991 + (LL) 248
1D Compatibility (HY) -13200 + (ID) 4150
Total energy: -73206.0 ( -77.14 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_2WUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WUT-query.scw
PDB file :
Tito_Scwrl_2WUT.pdb
: