Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
3UEX Chain:A ((1-162))
----------------LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMEN---PEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
General information:
TITO was launched using:
RESULT:
Template:
3UEX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111449 for 1199 contacts (-93.0/contact) +
2D Compatibility (PS) -16365 + (NN) 2517 + (LL) 2060
1D Compatibility (HY) -24000 + (ID) 7950
Total energy: -155187.0 ( -129.43 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_3UEX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UEX-query.scw
PDB file :
Tito_Scwrl_3UEX.pdb
: