Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
1P2U Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQE----MRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1P2U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95417 for 1297 contacts (-73.6/contact) +
2D Compatibility (PS) -18179 + (NN) -8493 + (LL) 800
1D Compatibility (HY) -22800 + (ID) 8100
Total energy: -152189.0 ( -117.34 by residue)
QMean score : 0.723
(partial model without unconserved sides chains):
PDB file :
Tito_1P2U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P2U-query.scw
PDB file :
Tito_Scwrl_1P2U.pdb
: