Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
FPTDDDDKIVGGYTCAANSIPYQVSLNSGSHFCGGSLINSQWVVSAAHCYKSRIQVRLGEHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPRSCAAAGTECLISGWGNTKSSGSSYPSLLQCLKAPVLSDSSCKSSYPGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQLQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTIAAN
1FN6 Chain:A ((1-223))
--------IVGGYTCAANSIPYQVSLNSGSHFCGGSLINSQWVVSAAHCYKSRIQVRLGEHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPRSCAAAGTECLISGWGNTKSSGSSYPSLLQCLKAPVLSNSSCKSSYPGQITGNMICVGFLQGGKDSCQGDSGGPVVCNGQLQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTIAAN
General information:
TITO was launched using:
RESULT:
Template:
1FN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158441 for 1901 contacts (-83.3/contact) +
2D Compatibility (PS) -24718 + (NN) -15305 + (LL) -196
1D Compatibility (HY) -31200 + (ID) 11050
Total energy: -240910.0 ( -126.73 by residue)
QMean score : 0.806
(partial model without unconserved sides chains):
PDB file :
Tito_1FN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FN6-query.scw
PDB file :
Tito_Scwrl_1FN6.pdb
: