Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
3SIZ Chain:A ((8-226))
-------VMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMAHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLL--
General information:
TITO was launched using:
RESULT:
Template:
3SIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -189746 for 1917 contacts (-99.0/contact) +
2D Compatibility (PS) -23517 + (NN) -5877 + (LL) 376
1D Compatibility (HY) -32000 + (ID) 10850
Total energy: -261614.0 ( -136.47 by residue)
QMean score : 0.825
(partial model without unconserved sides chains):
PDB file :
Tito_3SIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SIZ-query.scw
PDB file :
Tito_Scwrl_3SIZ.pdb
: