Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEAPQEPQS
4HRU Chain:A ((4-234))
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQK---------GPEVREYREKVETELQGVCDTVLGLLDSHLI-EAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT-----------------
General information:
TITO was launched using:
RESULT:
Template:
4HRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90564 for 1684 contacts (-53.8/contact) +
2D Compatibility (PS) -23943 + (NN) -12298 + (LL) 344
1D Compatibility (HY) -29200 + (ID) 11050
Total energy: -166711.0 ( -99.00 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_4HRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HRU-query.scw
PDB file :
Tito_Scwrl_4HRU.pdb
: