Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSE---VVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRL-PLARVRLVEVGGDVQLDSVRIF
3ZSK Chain:A ((1-132))
MLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDF----QRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTS----
General information:
TITO was launched using:
RESULT:
Template:
3ZSK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64022 for 930 contacts (-68.8/contact) +
2D Compatibility (PS) -13708 + (NN) -6683 + (LL) 792
1D Compatibility (HY) -12400 + (ID) 2450
Total energy: -98471.0 ( -105.88 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3ZSK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZSK-query.scw
PDB file :
Tito_Scwrl_3ZSK.pdb
: