Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
1XB0 Chain:A ((6-97))
--------------TNLPRNPSMTGYEARLITFGTWMYSVNKEQLARAGFYAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLT-----------
General information:
TITO was launched using:
RESULT:
Template:
1XB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20634 for 668 contacts (-30.9/contact) +
2D Compatibility (PS) -10081 + (NN) -6423 + (LL) 1240
1D Compatibility (HY) -12400 + (ID) 3900
Total energy: -52198.0 ( -78.14 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1XB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XB0-query.scw
PDB file :
Tito_Scwrl_1XB0.pdb
: