Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLETQDALYVALELVIAALSVAGNVLVCAAVGTANTLQTPTNYFLVSLAAADVAVGLFAIPFAITISL-------GFCTDFYGCLFLACFVLVLTQSSIFSLLAVAVDRYLAICVPLRYKSLVTGTRARGVIAVLWVLAFGIGLTPFL--GWNSKDSATNNCTEPWDGTTNESCCLVKCLFENVVPMSYMVYFNFFGCVLPPLLIMLVIYIKIFLVA---CRQLQRTELMDHSRTTLQREIHAAKSLAMIVGIFALCWLPVHAVNCVTLFQPAQGKNKPKWAMNMAILLSHANSVVNPIVYAYRNRDFRYTFHKIISRYLLCQADVKSGNGQAGVQPALGVGL |
| 2Y00 Chain:A ((20-300)) | ---------------LVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLC-----VTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQ------DPGCC------DFVTNRAYAIASSIISFYI-PLLIMIFVALRVYREAKEQ------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVF---NRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238702 for 1910 contacts (-125.0/contact) +
2D Compatibility (PS) -26496 + (NN) -9149 + (LL) 5956
1D Compatibility (HY) -31200 + (ID) 5000
Total energy: -304591.0 ( -159.47 by residue)
QMean score : 0.306
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