Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQP-SVSLTVAAL-------GLAGNGLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGALQG-WSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSVIVWLLSLLLALPALLFSQDGQREGQRRCRLIFPEGLTQTVKG-ASAVAQVALGFALPLGVMVACYALLGRTLLAAR----GPERRRALRVVVALVAAFVVLQL----PYSLALLLDTADLLAARERSCPASKRKDVALLVTSGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRRGCPRRPRLSSCSAPTETHSLSWDN |
| 4EA3 Chain:A ((121-405)) | --------------------------------------------PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKM-KTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP--------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPT--PQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVL---AQGLGVQ----PSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFR---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185746 for 1911 contacts (-97.2/contact) +
2D Compatibility (PS) -27456 + (NN) -15275 + (LL) 3416
1D Compatibility (HY) -24800 + (ID) 4150
Total energy: -254011.0 ( -132.92 by residue)
QMean score : 0.368
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