Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPF---------WAHAGGDPMCKILIGLYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFVVYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLY-------VQMRKTLRFREQRYSL---FKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNL-DKSVHITKLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV |
| 4N6H Chain:A ((128-412)) | ----------------------------------------ITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPF--GELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLI-NICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQ----FPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHI------FVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFK----RCFRQLCRKPCG-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235361 for 1972 contacts (-119.4/contact) +
2D Compatibility (PS) -26887 + (NN) -9918 + (LL) 4672
1D Compatibility (HY) -29200 + (ID) 3750
Total energy: -300444.0 ( -152.35 by residue)
QMean score : 0.299
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