Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLEVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQ-WVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVG---RTALRVLQLVAGFLLPLLVMAYCYAHILAVLLV--SRGQRRLRAM-RLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL |
| 4RWA Chain:A ((125-406)) | -------------------------------------------------------ITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVP--IMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLL----GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVVAALHLCIALGYANSSLNPVLYAFLDENFK-RCFRQLC---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -270158 for 2015 contacts (-134.1/contact) +
2D Compatibility (PS) -27372 + (NN) -11863 + (LL) 4688
1D Compatibility (HY) -28800 + (ID) 4300
Total energy: -337805.0 ( -167.65 by residue)
QMean score : 0.314
|
|
|