Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEHDYHEDYGFSSFNDSSQEEHQDFLQFSKVFLPCMYLVVFVCGLVGNSLVLVISIFYHKLQSLTDVFLVNLPLADLVFVCTLPFWAYAGIHE-WVFGQVMCKSLLGIYTINFYTSMLILTCITVDRFIVVVKATKA--YNQQAKRMTWGKVTSLLIWVISLLVSLPQIIYGNVFNLD-KLICGYHDEAIS----TVVLATQMTLGFFLPLLTMIVCYS----VIIKTLLHAGGFQKHRSLKIIFLVMAVFLLTQM----PFNLM----KFIRSTHWEYYAMTSFHYTIMVTEAIAYLRACLNPVLYAFVSLKFRKNFWKLVKDIGCLPYLGVSHQWKSSEDNSKTFSASHNVEATSMFQL |
| 4RWA Chain:A ((128-406)) | ------------------------------------LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAK----AKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLL---------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCI----ALGYANSSLNPVLYAFLDENFKRCFRQLC--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216035 for 1838 contacts (-117.5/contact) +
2D Compatibility (PS) -25330 + (NN) -6389 + (LL) 6280
1D Compatibility (HY) -27200 + (ID) 4100
Total energy: -272774.0 ( -148.41 by residue)
QMean score : 0.213
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