Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSAGNGTPWDATWNITVQWLAVDIACRTLMFLK---LMATYSAAFLPVVIGLDRQAAVLNPL---GSRSGVRK--LLGAAWGLSFLLAFPQLFLFHTVHCAGPVP---FTQCVTKGSFKAQWQETT----YNLFTFCCLFLLPLTAMAICYSRIVLSVSRPQTRKGSHAPAGEFALPRSFDNCPRVRLRALRLALLILLTFILCWTPYYLLGMWYWFSPTMLTEVPPSLSHILFLLGLLNAPLDPLLYGAFTLGCRRGHQELSIDSSKEGSGRMLQEEIHAFRQLEVQKTVTSRRAGETKGISITSI 2YDO Chain:A ((73-289)) ------------------------ACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWN--NCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMES--------------TLQKEVHAAKSLAIIVGL-FALCWLPLHIINCFTFFCPD-CSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAAENLYF-----------------------

General information: TITO was launched using: RESULT: Template: 2YDO.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -158507 for 1277 contacts (-124.1/contact) + 2D Compatibility (PS) -20182 + (NN) -11047 + (LL) 3296 1D Compatibility (HY) -18400 + (ID) 2650 Total energy: -207490.0 ( -162.48 by residue) QMean score : 0.261

(partial model without unconserved sides chains): PDB file : Tito_2YDO.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2YDO-query.scw PDB file : Tito_Scwrl_2YDO.pdb: