Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAAAFADSNSSSMNVSFAHLHFAGGYLPSDSQDWRTIIPALLVAVCLVGFVGNLCVIGILLHNAWKGKPSMIHSLILNLSLADLSLLLFSAPIRATAYSKSVWDLGWFVCKSSDWFIHTCMAAKSLTIVVVAKVCFMYASDPAKQVSIHNYTIWSVLVA-IWTVASLLPLPEWFFSTIRHHEGVEMCLVDVPAVAEEFMSM-FGKLYPLLAFGLPLFFASFYFWRAYDQCKK---RGTKTQNLRNQIRSKQVTVMLLSIAI-ISALLWLPEWVAWLWVWHLKAAGPAPPQGFIALSQVLMFSISSANPLIFLVMSEEFREGLKGVWKWMITKKPPTVSESQETPAGNSEGLPDKVPSPESPASIPEKEKPSSPSSGKGKTEKAEIPILPDVEQFWHERDTVPSVQDNDPIPWEHEDQETGEGVK |
| 2Y03 Chain:A ((7-296)) | -------------------------------SQQWEAGMSLLMALVVLLIVAGNVLVIAAI--GSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR-------SRVMLMREHKALKTLGIIMGVFTLCWLPFFL--VNIVNVFNRDLVPDWLFVAFNW-LGYANSAMNPIIY-CRSPDFRKAFKRLLA------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224815 for 2027 contacts (-110.9/contact) +
2D Compatibility (PS) -28381 + (NN) -11283 + (LL) 5408
1D Compatibility (HY) -24000 + (ID) 3050
Total energy: -286121.0 ( -141.15 by residue)
QMean score : 0.263
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