Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPTEPWSPSPGSAPWDYSGLDGLEELELCPAGDLPYGYVYIPALYLAAFAVGLLGNAFVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFALAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTP-RCALASCCGVWAVALLAGLPSLVYRGLQPLPGGQDSQCG-EEPSHAFQGLSLL-LLLLTFVLPLVVTLFCYCRISRRLRR------PPHVGRARRNSLRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLALRWGLTIATCLAFVNSCANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRDDSSVFRCRAQAANTASASW |
| 4N6H Chain:A ((126-402)) | ---------------------------------------IAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLP-FQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINIC-IWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRD---PLVVA---ALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203670 for 2045 contacts (-99.6/contact) +
2D Compatibility (PS) -28271 + (NN) -17502 + (LL) 2680
1D Compatibility (HY) -24000 + (ID) 4200
Total energy: -274963.0 ( -134.46 by residue)
QMean score : 0.283
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