Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANASEPGGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDLCLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGVTRYLAI----AHHRFYAERLAGWPCAAMLVCAAWALALAAAFPPVLDGGG---DDEDAPCALEQ-RPDGAPGALGFLLLLAVVVGATHLVYLRLLFFIHDRRKMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAVTLLFLLLWGPYVVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPCCQSPRTTQATHPCDLKGIGL |
2I36 Chain:A ((42-326)) | ----------------------AYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT----GCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVV---HFIIPLIVIFFCY-------GQLVFTVKEAAAQQQESATTQ---------------------------------------KAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2I36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -258535 for 2102 contacts (-123.0/contact) +
2D Compatibility (PS) -29173 + (NN) -20222 + (LL) 3796
1D Compatibility (HY) -27200 + (ID) 3450
Total energy: -334784.0 ( -159.27 by residue)
QMean score : 0.295
|
|
|