Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGPGEALLAGLLVMVLAVALLSNALVLLCCAYSAELRTRASGVLLVNLSLGHLLLAALDMPFTLLGVMRGRTPSAPGACQVIGFLDTFLASNAALSVAALSADQWLAVGFPLRYAGRLRPRYAGLLLGCAWGQSLAFSGAALGCSWLGY--SSAFASCSLRLPPEPERPRFAAFTATLHAVGFVLPLAVLCLTSLQ-VHRVARRHCQRMDTVTMKALALLADLHPSVRQRCLIQQKRRRHRATRKIGIAIATFLICFAP------YVMTRLAELVP--FVTVNAQWGILSKCLTYSKAVADPFTYSLLRRPFRQVLAGMVHRLLKRTPRPASTHDSSLDVAGMVHQLLKRTPRPASTHNGSVDTENDSCLQQTH |
4BEZ Chain:A ((41-318)) | -----SMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILL-NLAVADLFMVFGDFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMALACAAPPL-VGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESAT---------------------TQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPA---FFAK----TSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163133 for 2067 contacts (-78.9/contact) +
2D Compatibility (PS) -27218 + (NN) -11005 + (LL) 5312
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -200194.0 ( -96.85 by residue)
QMean score : 0.223
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