Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTVPVFGTKLTPINGREETPCYNQTLSFTVLTCIISLVGLTGNAVVLW-LLGYRMRRNAVSIYILNLAAADFLFLS---FQIIRLPLRLINISHLIRKILVSVMTFPYFTGLSMLSAISTERCLSVLWPIWYRCRRPTHLSAVVCVLLWGLS-------LLFSMLEWR----FCDFLFSGADSSWCETSDFIPVAWLIFLCVVLCVS-------SLVLLVRILCGSRKMP--LTRLYVTILLTVLVFLLCGLPFGILGALIYRMHLNL-EVLYCHVYLVCMSLSSLNSSANPIIYFFVGSFRQRQNRQNLKLVLQRALQDKPEVDKGEGQLPEESLELSGSRLGP |
| 4RWD Chain:A ((122-404)) | --------------------------AIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYW-DTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220455 for 1873 contacts (-117.7/contact) +
2D Compatibility (PS) -25901 + (NN) -2250 + (LL) 2964
1D Compatibility (HY) -22400 + (ID) 3500
Total energy: -271542.0 ( -144.98 by residue)
QMean score : 0.150
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