Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSENGSFANCCEAGGWAVRPGWSGAGSARPSRTPRPPWVAPALSAVLIVTTA-----VDVVGNLLVILSVLRNRKLRNAGNLFLVSLALADLVVAFYPYPLILVAIFYDGWALGEEHCKASAFVMGLSVIGSVFNITAIAINRYCYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLP-----NFFVGSLEYDPRIYSCTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARRKAKPESRLCLKPSDLRS---------FLTMFVVFVIFAICWAPLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYFNSCLNAIVYGLLNQNFRREYKRILLALWNPRHCIQDASKGSHAEGLQSPAPPIIGVQHQADAL |
| 4MQS Chain:A ((36-333)) | ----------------------------------------KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAVTFGTAIAA--FYLPVIIMTVLYWHISRASKS--------------------PPPSREKKVTRTILAILLAFIITWAPYNVM---VLIN-TFCAPCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLM-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264896 for 1888 contacts (-140.3/contact) +
2D Compatibility (PS) -26034 + (NN) -5579 + (LL) 4076
1D Compatibility (HY) -30800 + (ID) 3750
Total energy: -326983.0 ( -173.19 by residue)
QMean score : 0.311
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