Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKINQTFVREFILLGLSGYPKLEIIFFALILVMYVVILIGNGVLIIASILDS-RLHMPMYFFLGNLSFLDICYTTSSIP--STLVSLISKKRNISFSG---CAVQMFFGFAMGSTECFLLGMMAFDRYVAICNPLRYPIIMNKVVYVLLTSVSWLSGGINSTVQTSLAMRWPFCGNNIINHFLCEILAVLKL----ACSDISVNIVTLAVSNIAFLVLPLLVIFF----SYMFILYTILRTNSATGR-HKAFSTCSAHLTVVIIFYGTIFFMYAKPKSQDLLGKDNLQATEGLVSMFYGVVTPMLNPIIYSLRNKDVKAAIKYLLSRKAINQ |
| 2VT4 Chain:A ((15-298)) | ----------------------------SLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-----RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL--PIMMHW----------WRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--------EHKALKTLGIIMGVFTLCWLPFFLV----NIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204329 for 1862 contacts (-109.7/contact) +
2D Compatibility (PS) -25038 + (NN) -659 + (LL) 4276
1D Compatibility (HY) -22000 + (ID) 3350
Total energy: -251100.0 ( -134.85 by residue)
QMean score : 0.273
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