Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTETSLSSQCFPMSVLNNTIAEPLIFLLMGIPGLKATQYWISIPFCLLYVVAVSGNSMILFVVLCERSLHKPMYYFLSMLSATDLSLSLCTLSTTLGVFWFEAREINLNACIAQMFFLHGFTFMESGVL----------LAMAFDRFVAICYPLRYTTILTNARIAKIGMSMLIRNVAVMLPVMLFVKRLSFCSSMVLSHSYCYHVDLIQLSCTDNRINSILGLFALLSTTGFDCPCILLSYILIIRSVLSIASSEERR-KAFNTCTSHISA-------VSIFYLPLISLSLVHRYGHSAPPFVHIIMANVFLLI-----PPVLNPIIYSVKIKQIQKAIIKVLIQKHSKSNHQLFLIRDKAIYE |
| 4UG2 Chain:A ((18-309)) | -------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--------ISTGFCAA----CHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNN---CGQPKEGKAHSQGCGEGQVACL---FEDVVPMNYMVYFNFFA--CVLVPLLLMLGVYLRIFLAARRQL-ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKI-IRSHVLR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204557 for 1827 contacts (-112.0/contact) +
2D Compatibility (PS) -25635 + (NN) -1425 + (LL) 7336
1D Compatibility (HY) -28800 + (ID) 3300
Total energy: -256381.0 ( -140.33 by residue)
QMean score : 0.201
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