Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAWENQTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYFLLSQLFLMDLMLICSTVPKMAFNYLSGSKSISMAGCATQIFFYVSLLGSECFL--LAVMSYDRYIAICHPLRYTNLMRPKICGLM-TAFSWILGSMDAIIDAVATFSFSYCGSREIAHFFCDFPSLLILSC-------NDTSIFEKVLFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLMVVGM--------------YYGAGLFMYIRPTSDRSPMQDKLVSVFYTILTPMLNPLIYSLRNKEVTRALRKVL--GKGKCGE |
| 4J4Q Chain:A ((43-326)) | -------------------------YMFLLIMLGFPINFLTLYVTVQ----HKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFF--ATLGGEIALWSLVVLAIERYVVVCKPM--SNFRFGENHAIMGVAFTWVM--------ALA------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQ--QESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPI-FMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223710 for 1875 contacts (-119.3/contact) +
2D Compatibility (PS) -26743 + (NN) -10995 + (LL) 3432
1D Compatibility (HY) -25200 + (ID) 3250
Total energy: -286466.0 ( -152.78 by residue)
QMean score : 0.256
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