Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKANETSPVMGFVLLRLSAHPELEKTFFVLILLMYLVILLGNGVLILVTILDSRLHTPMYFFLGNLSFLDICFTTSSVPLVLDSFLTPQETISFSA--CAVQMALSFAMAGTECLLLSMMAFDRYVAICNPLRYSVIMSKAAYMPMAASSWAIGGAASVVHTSLAIQLPFCGDNVINHFTCEILAVLKLACADISINVISMEVTNVIFLGVPVLFISF----SYVFIITTILRIPSAEGRK---------KVFSTCSAHLTVVIVFYGTLFFMYGKPKSKDSMGADKEDL-SDKLIPLF--YGVVTPMLNPIIYSLRNKDVKAAVRRLLRPKGFTQ |
| 2Y00 Chain:A ((9-299)) | ----------------------QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPF--GATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSF----LPIMMHWWRDEDPQALKC----YQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLV-------NIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223580 for 1922 contacts (-116.3/contact) +
2D Compatibility (PS) -26369 + (NN) -5327 + (LL) 3796
1D Compatibility (HY) -24000 + (ID) 3450
Total energy: -278930.0 ( -145.12 by residue)
QMean score : 0.213
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