Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPQNTTQVSMFVLLGFSQTQELQKFLFLLFLLVYVTTIVGNLLIMVTVTFDCRLHTPMYFLLRNLALIDLCYSTVTSPKMLVDFLHETKTISYQGCMAQIFFFHLLGGGTVFFLSVMAYDRYIAISQPLRYVTIMNTQLCVGLVVAAWVGGFVHSIVQLALILPLPFCGPNILDNFYCDVPQVLRLACTDTSLLEFLMISNSGL------------LVIIWFLLLLISYTVILVMLRSHSGKARRKAASTCTTHIIVVSMIFIPC--------IYIYTWP---FTPFLMDKAVSISYTVMTPMLNPMIYTLRNQDMKAAMRRLGKCLVICRE |
| 3C9M Chain:A ((44-317)) | -----------------------------MFLLIMLGFPINFLTLYVTVQHK-KLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG-VAFTWV---------MALA-----CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFM--TIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -241183 for 1946 contacts (-123.9/contact) +
2D Compatibility (PS) -24122 + (NN) 9341 + (LL) 3924
1D Compatibility (HY) -22800 + (ID) 3250
Total energy: -278090.0 ( -142.90 by residue)
QMean score : 0.185
|
|
|