Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGAKNNVTEFVLFGLFESREMQHTCFVVFFLFHVLTVLGNLLVIITINARKTLKSPMYFFLSQLSFADICYPSTTIPKMIADTFVEHKIISFNGCMTQLFSAH--FFGGTEIFLLTAMAYDRYVAICRPLHYTAIMDCRKCGLLAGASWLAGFLHSILQTLLTVQLPFCGPNEIDNFFCDVHPLLKLACADTYMVGLIVVANSGMISLASFFILIISYVIILLNLRSQSSEDRR-----------------KAVSTCGSHVITVLLVLMPPMFMYIRP--STTLAADKLIILFNIV--MPPLLNPLIYTLRNNDVKNAMRKLFRVKRSLGEK |
| 2YCW Chain:A ((7-299)) | -----------------SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAI----SALVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIAS----SIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209037 for 2002 contacts (-104.4/contact) +
2D Compatibility (PS) -27155 + (NN) -3348 + (LL) 3044
1D Compatibility (HY) -29600 + (ID) 3300
Total energy: -269396.0 ( -134.56 by residue)
QMean score : 0.211
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